HHsearch alignment for GI: 254781026 and conserved domain: KOG0734
>KOG0734 consensus.
Probab=98.64 E-value=9.4e-08 Score=66.25 Aligned_cols=114 Identities=27% Similarity=0.385 Sum_probs=63.8
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCC---CHHHH
Q ss_conf 977786059999999887488989788532300000027888756531112020377521001102343456---82799
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQV---LPGED 77 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~---~pG~i 77 (186)
T Consensus 342 LvGPPGTGKTlLARAvAGEA~---------V-PFF~~sGSE-F-----------------dEm~VGvGArRVRdLF~aAk 393 (752)
T KOG0734 342 LVGPPGTGKTLLARAVAGEAG---------V-PFFYASGSE-F-----------------DEMFVGVGARRVRDLFAAAK 393 (752)
T ss_pred EECCCCCCHHHHHHHHHCCCC---------C-CEEECCCCC-H-----------------HHHHHCCCHHHHHHHHHHHH
T ss_conf 768999755699998605568---------9-747416620-4-----------------45422014899999999987
Q ss_pred HHCCCCEEEEECHHH-----------CCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 827998899803878-----------598899999999971952301003078984701567522746588788988764
Q gi|254781026|r 78 SLAHNGVLFLDEIPE-----------FSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVC 146 (186)
Q Consensus 78 ~lAh~GVLflDE~~e-----------~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c 146 (186)
T Consensus 394 ~~A-PcIIFIDEiDavG~kR~~~~~~y~kqTlNQLLvEmDGF~-----------qNeGiIvigATNfpe-----~----- 451 (752)
T KOG0734 394 ARA-PCIIFIDEIDAVGGKRNPSDQHYAKQTLNQLLVEMDGFK-----------QNEGIIVIGATNFPE-----A----- 451 (752)
T ss_pred HCC-CEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC-----------CCCCEEEEECCCCHH-----H-----
T ss_conf 349-859997200220566786277899989999999842867-----------688669995168745-----5-----
Q ss_pred CCCHHHHHHHHHHCCHHHH--HCCCEEEECCCC
Q ss_conf 3899999999851224321--004259983885
Q gi|254781026|r 147 IRGPRCATEYQARISGPLM--DRIDIRIAVPSR 177 (186)
Q Consensus 147 ~c~~~~~~~Y~~rls~pll--dR~Dl~v~~~~~ 177 (186)
T Consensus 452 -------------LD~AL~RPGRFD~~v~Vp~P 471 (752)
T KOG0734 452 -------------LDKALTRPGRFDRHVTVPLP 471 (752)
T ss_pred -------------HHHHHCCCCCCCEEEECCCC
T ss_conf -------------56873488755336746897