HHsearch alignment for GI: 254781026 and conserved domain: KOG0738

Probab=98.28  E-value=1.9e-06  Score=58.61  Aligned_cols=116  Identities=27%  Similarity=0.381  Sum_probs=60.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCC--CC-HHHH
Q ss_conf             97778605999999988748898978853230000002788875653111202037752100110234345--68-2799
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQ--VL-PGED   77 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~--~~-pG~i   77 (186)
T Consensus       250 m~GPPGTGKTlLAKAvATE------------------c~tT-----F-----FNV--SsstltSKwRGeSEKlvRlLFem  299 (491)
T KOG0738         250 MVGPPGTGKTLLAKAVATE------------------CGTT-----F-----FNV--SSSTLTSKWRGESEKLVRLLFEM  299 (491)
T ss_pred             EECCCCCCHHHHHHHHHHH------------------HCCE-----E-----EEE--CHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             5679997478999999886------------------1672-----7-----874--02456555325269999999999


Q ss_pred             HHC-CCCEEEEECHH------------HCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCC
Q ss_conf             827-99889980387------------85988999999999719523010030789847015675227465887889887
Q gi|254781026|r   78 SLA-HNGVLFLDEIP------------EFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDEN  144 (186)
Q Consensus        78 ~lA-h~GVLflDE~~------------e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~  144 (186)
T Consensus       300 ARfyAPStIFiDEIDslcs~RG~s~EHEaSRRvKsELLvQmDG~~~t~e~-------~k~VmVLAATN~PW-----d---  364 (491)
T KOG0738         300 ARFYAPSTIFIDEIDSLCSQRGGSSEHEASRRVKSELLVQMDGVQGTLEN-------SKVVMVLAATNFPW-----D---  364 (491)
T ss_pred             HHHHCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC-------CEEEEEEECCCCCC-----C---
T ss_conf             98748853533567788725798650367888888999986334444456-------51699984368982-----0---


Q ss_pred             CCCCCHHHHHHHHHHCCHHHHHCCCE--EEECCC
Q ss_conf             64389999999985122432100425--998388
Q gi|254781026|r  145 VCIRGPRCATEYQARISGPLMDRIDI--RIAVPS  176 (186)
Q Consensus       145 ~c~c~~~~~~~Y~~rls~plldR~Dl--~v~~~~  176 (186)
T Consensus       365 ---------------iDEAlrRRlEKRIyIPLP~  383 (491)
T KOG0738         365 ---------------IDEALRRRLEKRIYIPLPD  383 (491)
T ss_pred             ---------------HHHHHHHHHHHHEEEECCC
T ss_conf             ---------------5799999876303312878