HHsearch alignment for GI: 254781026 and conserved domain: KOG0744
>KOG0744 consensus.
Probab=95.04 E-value=0.01 Score=36.70 Aligned_cols=127 Identities=23% Similarity=0.274 Sum_probs=62.0
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC-----HHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHH
Q ss_conf 977786059999999887488989-----788532300000027888756531112020377521001102343456827
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS-----LEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPG 75 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~-----~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG 75 (186)
T Consensus 182 lhGPPGTGKTSLCKaLaQkLSIR~~~~y~~~~liEins-hsLFSKWFsESgK-------------lV~kmF-----~kI~ 242 (423)
T KOG0744 182 LHGPPGTGKTSLCKALAQKLSIRTNDRYYKGQLIEINS-HSLFSKWFSESGK-------------LVAKMF-----QKIQ 242 (423)
T ss_pred EECCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEH-HHHHHHHHHHHHH-------------HHHHHH-----HHHH
T ss_conf 85799988227999998751465237644406999704-6788988712113-------------899999-----9999
Q ss_pred HHHHCCCC--EEEEECHHHCCH---------------HHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCC
Q ss_conf 99827998--899803878598---------------8999999999719523010030789847015675227465887
Q gi|254781026|r 76 EDSLAHNG--VLFLDEIPEFSP---------------QTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGM 138 (186)
Q Consensus 76 ~i~lAh~G--VLflDE~~e~~~---------------~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~ 138 (186)
T Consensus 243 ELv~d~~~lVfvLIDEVESLa~aR~s~~S~~EpsDaIRvVNalLTQlDrl----------K~~-~NvliL~TSNl~---- 307 (423)
T KOG0744 243 ELVEDRGNLVFVLIDEVESLAAARTSASSRNEPSDAIRVVNALLTQLDRL----------KRY-PNVLILATSNLT---- 307 (423)
T ss_pred HHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH----------CCC-CCEEEEECCCHH----
T ss_conf 99717896899980787888999875413799821899999999989986----------047-977999626267----
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCEEEECCCCCHH
Q ss_conf 889887643899999999851224321004259983885668
Q gi|254781026|r 139 SNKDENVCIRGPRCATEYQARISGPLMDRIDIRIAVPSRTHI 180 (186)
Q Consensus 139 ~~~~~~~c~c~~~~~~~Y~~rls~plldR~Dl~v~~~~~~~~ 180 (186)
T Consensus 308 -------------------~siD~AfVDRADi~~yVG~Pt~~ 330 (423)
T KOG0744 308 -------------------DSIDVAFVDRADIVFYVGPPTAE 330 (423)
T ss_pred -------------------HHHHHHHHHHHHHEEECCCCCHH
T ss_conf -------------------77788861175421103896399