HHsearch alignment for GI: 254781026 and conserved domain: KOG2004

>KOG2004 consensus.
Probab=98.62  E-value=8.7e-08  Score=66.47  Aligned_cols=120  Identities=23%  Similarity=0.419  Sum_probs=71.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCC---CCCHHHH
Q ss_conf             9777860599999998874889897885323000000278887565311120203775210011023434---5682799
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGL---QVLPGED   77 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~---~~~pG~i   77 (186)
T Consensus       443 f~GPPGVGKTSI~kSIA~ALnRk--------FfRfSvGG~tDv-------------------AeIkGHRRTYVGAMPGki  495 (906)
T KOG2004         443 FVGPPGVGKTSIAKSIARALNRK--------FFRFSVGGMTDV-------------------AEIKGHRRTYVGAMPGKI  495 (906)
T ss_pred             EECCCCCCCCCHHHHHHHHHCCC--------EEEEECCCCCCH-------------------HHHCCCCEEEECCCCHHH
T ss_conf             86899877321899999984874--------699853663427-------------------764254211001488489


Q ss_pred             HH------CCCCEEEEECHHHCCH----HHHHHHHHHHHCCCE---EEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCC
Q ss_conf             82------7998899803878598----899999999971952---3010030789847015675227465887889887
Q gi|254781026|r   78 SL------AHNGVLFLDEIPEFSP----QTLNALRQPLETGEC---IIARANRKISYPSRIQLIAAMNPCRCGMSNKDEN  144 (186)
Q Consensus        78 ~l------Ah~GVLflDE~~e~~~----~~l~~L~~~le~g~v---~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~  144 (186)
T Consensus       496 Iq~LK~v~t~NPliLiDEvDKlG~g~qGDPasALLElLDPEQNanFlDHYLdVp~DL-SkVLFicTAN~i----------  564 (906)
T KOG2004         496 IQCLKKVKTENPLILIDEVDKLGSGHQGDPASALLELLDPEQNANFLDHYLDVPVDL-SKVLFICTANVI----------  564 (906)
T ss_pred             HHHHHHHCCCCCEEEEEHHHHHCCCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCCH-HHEEEEEECCCC----------
T ss_conf             999986177886588532234178877986899987439653553454202664211-106889853644----------


Q ss_pred             CCCCCHHHHHHHHHHCCHHHHHCCCEE
Q ss_conf             643899999999851224321004259
Q gi|254781026|r  145 VCIRGPRCATEYQARISGPLMDRIDIR  171 (186)
Q Consensus       145 ~c~c~~~~~~~Y~~rls~plldR~Dl~  171 (186)
T Consensus       565 -------------dtIP~pLlDRMEvI  578 (906)
T KOG2004         565 -------------DTIPPPLLDRMEVI  578 (906)
T ss_pred             -------------CCCCHHHHHHHHEE
T ss_conf             -------------56985664122322