HHsearch alignment for GI: 254781026 and conserved domain: PHA01747

>PHA01747 putative ATP-dependent protease.
Probab=97.60  E-value=5.7e-05  Score=49.96  Aligned_cols=140  Identities=21%  Similarity=0.224  Sum_probs=81.2

Q ss_pred             CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHCCC
Q ss_conf             77860599999998874889897885323000000278887565311120203775210011023434568279982799
Q gi|254781026|r    3 GPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSLAHN   82 (186)
Q Consensus         3 GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~lAh~   82 (186)
T Consensus       197 SnrgTGKTTtf~ilqe~~n------------f~-----------Y~tEp--------Ptya~LvyDAktn~~G~Vf~s~G  245 (425)
T PHA01747        197 SNRGTGKTTTFVILQELFN------------FR-----------YYTEP--------PTYANLVYDAKTNALGLVFLSNG  245 (425)
T ss_pred             CCCCCCCEEHHHHHHHHHC------------CE-----------ECCCC--------CCHHHHHHHCCCCCEEEEEECCC
T ss_conf             3689883221789999856------------45-----------20589--------62777764312351015773386


Q ss_pred             CEEEEECHHHCCHHHHHHHHHHHHCCCEEE--HHCCE-E---EEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             889980387859889999999997195230--10030-7---89847015675227465887889887643899999999
Q gi|254781026|r   83 GVLFLDEIPEFSPQTLNALRQPLETGECII--ARANR-K---ISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEY  156 (186)
Q Consensus        83 GVLflDE~~e~~~~~l~~L~~~le~g~v~i--~R~g~-~---~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y  156 (186)
T Consensus       246 --lifDEIqtwkds~~~aI~s~l~TGmenc~WtR~agtesda~tI~rcIPIifaGN~~s------~tld~y~tp~~i~~y  317 (425)
T PHA01747        246 --LIFDEIQTWKDSNMRAINSTLSTGMENCVWTRGAGTESDAATIVRCIPIIFAGNPDS------STLDTYQTPNYIKNY  317 (425)
T ss_pred             --EEEEHHHHCCCCHHHHHHHHHHHCCHHEEEECCCCCCCCCCHHHHCEEEEECCCCCC------EEEEEECCCCHHHHH
T ss_conf             --587544432664088999998611011165247677766502231202898579874------000200384079999


Q ss_pred             HHH------CCHHHHHCCCEE-EECCCCCHHH
Q ss_conf             851------224321004259-9838856688
Q gi|254781026|r  157 QAR------ISGPLMDRIDIR-IAVPSRTHIR  181 (186)
Q Consensus       157 ~~r------ls~plldR~Dl~-v~~~~~~~~~  181 (186)
T Consensus       318 L~~~e~f~~~t~AiLDRiaii~~~~kk~tyd~  349 (425)
T PHA01747        318 LVSYELFQSLTKAILDRIAIIIVNEKKITYDD  349 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf             99999887677999988999986125565767