HHsearch alignment for GI: 254781026 and conserved domain: PRK05022
>PRK05022 anaerobic nitric oxide reductase transcription regulator; Provisional.
Probab=99.42 E-value=5.4e-13 Score=97.02 Aligned_cols=104 Identities=30% Similarity=0.391 Sum_probs=79.3
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCC-----CCCCHHHCCC-------CC
Q ss_conf 77786059999999887488989788532300000027888756531112020377-----5210011023-------43
Q gi|254781026|r 2 IGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPH-----HSVTIAALIG-------GG 69 (186)
Q Consensus 2 ~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~-----~~~~~~~l~g-------g~ 69 (186)
T Consensus 215 ~GEtGTGKelvAr~IH~~S~R--------------------~~~------Pfv~vNCaalpe~l~EseLFGh~kGaFtGA 268 (510)
T PRK05022 215 TGETGVGKELVARAIHQASPR--------------------AVK------PLVYLNCAALPESLAESELFGHVKGAFTGA 268 (510)
T ss_pred ECCCCCCHHHHHHHHHHCCCC--------------------CCC------CCEEEECCCCCHHHHHHHHCCCCCCCCCCC
T ss_conf 898981399999999966887--------------------899------857888999985678998659777886886
Q ss_pred CCCCHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCC
Q ss_conf 4568279982799889980387859889999999997195230100307898470156752274
Q gi|254781026|r 70 LQVLPGEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNP 133 (186)
Q Consensus 70 ~~~~pG~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NP 133 (186)
T Consensus 269 ~~~r~G~fe~A~gGTLfLDEI~~Lpl~~Q~KLLrvLq~g~--iqrvG~~~~~~vdvRIIAATnr 330 (510)
T PRK05022 269 ISNRSGKFELADGGTLFLDEIGELPLALQAKLLRVLQYGE--IQRVGSDRSLRVDVRVIAATNR 330 (510)
T ss_pred CCCCCCCEEECCCCEEEEECHHHCCHHHHHHHHHHHHCCE--EEECCCCCEEEEEEEEEEECCC
T ss_conf 5567881017789879875745499999999999984795--8855899466666899960783