HHsearch alignment for GI: 254781026 and conserved domain: PRK05707

>PRK05707 DNA polymerase III subunit delta'; Validated.
Probab=96.72  E-value=0.0069  Score=37.70  Aligned_cols=92  Identities=18%  Similarity=0.164  Sum_probs=50.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCC--HHHH---HHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHH
Q ss_conf             977786059999999887488989--7885---32300000027888756531112020377521001102343456827
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLS--LEES---LEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPG   75 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~--~~e~---le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG   75 (186)
T Consensus        27 f~G~~G~GK~~lA~~~A~~LlC~~~~~~~~Cg~C~sC~-~~~~~~---------HPD~~~i~p-------e~~~~~I~Id   89 (328)
T PRK05707         27 LHGPAGIGKRALAERLAAFLLCEAPQGGGACGSCKGCQ-LLAAGS---------HPDNFVLEP-------EEADKPIKVD   89 (328)
T ss_pred             EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH-HHHCCC---------CCCEEEEEC-------CCCCCCCCHH
T ss_conf             47999867999999999998489999989998888999-987589---------998799842-------6667769799


Q ss_pred             HH-----------HHCCCCEEEEECHHHCCHHHHHHHHHHHHCCC
Q ss_conf             99-----------82799889980387859889999999997195
Q gi|254781026|r   76 ED-----------SLAHNGVLFLDEIPEFSPQTLNALRQPLETGE  109 (186)
Q Consensus        76 ~i-----------~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~  109 (186)
T Consensus        90 qIR~l~~~~~~~~~~g~~KV~iI~~Ae~m~~~AaNALLKtLEEPp  134 (328)
T PRK05707         90 QVRELVSFVVQTAQLGGRKVVLIEPAEAMNRNAANALLKSLEEPS  134 (328)
T ss_pred             HHHHHHHHHHHCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHHCCC
T ss_conf             999999998317667895799950287738999999999850789