HHsearch alignment for GI: 254781026 and conserved domain: PRK06090
>PRK06090 DNA polymerase III subunit delta'; Validated.
Probab=95.27 E-value=0.014 Score=35.85 Aligned_cols=102 Identities=18% Similarity=0.147 Sum_probs=50.6
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC-HHHHHHHH--CEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHH
Q ss_conf 977786059999999887488989-78853230--000002788875653111202037752100110234345682799
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS-LEESLEVS--MIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGED 77 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~-~~e~le~~--~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i 77 (186)
T Consensus 30 ~~g~~G~Gk~~la~~la~~LlC~~~~~~~Cg~C~sC~l~~~g~HPD-~~~i--~pe-~~~k~I~vd~----IR~l~~~~~ 101 (319)
T PRK06090 30 LQSDEGLGVESLVELFSHALLCQNYQSEACGFCHSCELMKSGNHPD-LHVI--KPE-KEGKSITVEQ----IRQCNRLAQ 101 (319)
T ss_pred EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCC-CEEE--ECC-CCCCCCCHHH----HHHHHHHHH
T ss_conf 6799985799999999999808999999887787799987589998-2366--123-3567687999----999999975
Q ss_pred ---HHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCE
Q ss_conf ---827998899803878598899999999971952
Q gi|254781026|r 78 ---SLAHNGVLFLDEIPEFSPQTLNALRQPLETGEC 110 (186)
Q Consensus 78 ---~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v 110 (186)
T Consensus 102 ~~~~~g~~KV~iI~~ae~m~~~AaNALLKtLEEPp~ 137 (319)
T PRK06090 102 ESSQLGGYRLFVIEPADAMNESASNALLKTLEEPAP 137 (319)
T ss_pred HCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCCC
T ss_conf 452106936999814443499999999998428998