HHsearch alignment for GI: 254781026 and conserved domain: PRK06090

>PRK06090 DNA polymerase III subunit delta'; Validated.
Probab=95.27  E-value=0.014  Score=35.85  Aligned_cols=102  Identities=18%  Similarity=0.147  Sum_probs=50.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCC-HHHHHHHH--CEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHH
Q ss_conf             977786059999999887488989-78853230--000002788875653111202037752100110234345682799
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLS-LEESLEVS--MIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGED   77 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~-~~e~le~~--~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i   77 (186)
T Consensus        30 ~~g~~G~Gk~~la~~la~~LlC~~~~~~~Cg~C~sC~l~~~g~HPD-~~~i--~pe-~~~k~I~vd~----IR~l~~~~~  101 (319)
T PRK06090         30 LQSDEGLGVESLVELFSHALLCQNYQSEACGFCHSCELMKSGNHPD-LHVI--KPE-KEGKSITVEQ----IRQCNRLAQ  101 (319)
T ss_pred             EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCC-CEEE--ECC-CCCCCCCHHH----HHHHHHHHH
T ss_conf             6799985799999999999808999999887787799987589998-2366--123-3567687999----999999975


Q ss_pred             ---HHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCE
Q ss_conf             ---827998899803878598899999999971952
Q gi|254781026|r   78 ---SLAHNGVLFLDEIPEFSPQTLNALRQPLETGEC  110 (186)
Q Consensus        78 ---~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v  110 (186)
T Consensus       102 ~~~~~g~~KV~iI~~ae~m~~~AaNALLKtLEEPp~  137 (319)
T PRK06090        102 ESSQLGGYRLFVIEPADAMNESASNALLKTLEEPAP  137 (319)
T ss_pred             HCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCCC
T ss_conf             452106936999814443499999999998428998