HHsearch alignment for GI: 254781026 and conserved domain: PRK06526

>PRK06526 transposase; Provisional.
Probab=97.53  E-value=5.3e-05  Score=50.11  Aligned_cols=118  Identities=24%  Similarity=0.238  Sum_probs=63.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCC-HHHCCCCCCCCCHHHHHH
Q ss_conf             9777860599999998874889897885323000000278887565311120203775210-011023434568279982
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVT-IAALIGGGLQVLPGEDSL   79 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~-~~~l~gg~~~~~pG~i~l   79 (186)
T Consensus       103 l~G~~GtGKThLA~Alg~~--------A~~~--G~~v--------~f-----~~~~~L~~~L~~a~~~g~~~~~~~--~l  157 (254)
T PRK06526        103 FLGPPGTGKTHLAIGLGIR--------ACQA--GHRV--------LF-----ATAAQWVARLAAAHHAGRLQDELV--KL  157 (254)
T ss_pred             EECCCCCCHHHHHHHHHHH--------HHHC--CCCE--------EE-----EEHHHHHHHHHHHHHCCCHHHHHH--HH
T ss_conf             9899998689999999999--------9986--9967--------99-----877999999999885580999999--85


Q ss_pred             CCCCEEEEECHHH--CCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             7998899803878--59889999999997195230100307898470156752274658878898876438999999998
Q gi|254781026|r   80 AHNGVLFLDEIPE--FSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQ  157 (186)
Q Consensus        80 Ah~GVLflDE~~e--~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~  157 (186)
T Consensus       158 ~~~dLLIiDe~g~~~~~~~~a~~lf~li~~Rye---~~----------S~IiTSn~~~~~W~~~f~D-------------  211 (254)
T PRK06526        158 GRIPLLIVDEVGYIPFEAEAANLFFQLVSSRYE---RA----------SLIVTSNKPFGRWGEVFGD-------------  211 (254)
T ss_pred             HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHC---CC----------CEEEECCCCHHHHHHHCCC-------------
T ss_conf             136877650213644788999999999999974---58----------8676658986688886486-------------


Q ss_pred             HHCCHHHHHCCC
Q ss_conf             512243210042
Q gi|254781026|r  158 ARISGPLMDRID  169 (186)
Q Consensus       158 ~rls~plldR~D  169 (186)
T Consensus       212 ~~la~AilDRL~  223 (254)
T PRK06526        212 DVVAAAMIDRLV  223 (254)
T ss_pred             HHHHHHHHHHHC
T ss_conf             899999999862