HHsearch alignment for GI: 254781026 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.24 E-value=7.4e-06 Score=55.12 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=67.8
Q ss_pred CCCCCCCHHHHHHHHHHHHCC-----CCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCC-HHHCCCCCCCCCH
Q ss_conf 977786059999999887488-----9897885323000000278887565311120203775210-0110234345682
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILL-----PLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVT-IAALIGGGLQVLP 74 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP-----~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~-~~~l~gg~~~~~p 74 (186)
T Consensus 43 FsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~-~i~~g~~-~D--viEida--asn~~VddIR~l~-e~v~~~P 115 (560)
T PRK06647 43 FSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCK-SIDNDSS-LD--VIEIDG--ASNTSVQDVRQIK-EEIMFPP 115 (560)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHCCCC-CC--EEEECC--CCCCCHHHHHHHH-HHHCCCC
T ss_conf 32899878999999999996599999988887887888-8745999-87--576436--4548889999999-9863287
Q ss_pred HHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 79982799889980387859889999999997195230100307898470156752274658878898876438999999
Q gi|254781026|r 75 GEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCAT 154 (186)
Q Consensus 75 G~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~ 154 (186)
T Consensus 116 ---~~~~yKV~IIDEahmLt~~A~NALLKtLEEP-------------P~~~~FILaTte~-------------------- 159 (560)
T PRK06647 116 ---ASSRYRVYIIDEVHMLSNSAFNALLKTIEEP-------------PPYIVFIFATTEV-------------------- 159 (560)
T ss_pred ---CCCCEEEEEECCHHHCCHHHHHHHHHHHHCC-------------CCCEEEEEECCCH--------------------
T ss_conf ---6687069996465655999999999986348-------------8755999977994--------------------
Q ss_pred HHHHHCCHHHHHCCCEEEECCCCC
Q ss_conf 998512243210042599838856
Q gi|254781026|r 155 EYQARISGPLMDRIDIRIAVPSRT 178 (186)
Q Consensus 155 ~Y~~rls~plldR~Dl~v~~~~~~ 178 (186)
T Consensus 160 ---~KI~~TI~SRCQ-~f~Fk~i~ 179 (560)
T PRK06647 160 ---HKLPATIKSRCQ-HFNFRLLS 179 (560)
T ss_pred ---HHCHHHHHHHHE-EEECCCCC
T ss_conf ---768489996510-41055599