HHsearch alignment for GI: 254781026 and conserved domain: PRK06647

>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.24  E-value=7.4e-06  Score=55.12  Aligned_cols=131  Identities=18%  Similarity=0.218  Sum_probs=67.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHCC-----CCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCC-HHHCCCCCCCCCH
Q ss_conf             977786059999999887488-----9897885323000000278887565311120203775210-0110234345682
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILL-----PLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVT-IAALIGGGLQVLP   74 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP-----~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~-~~~l~gg~~~~~p   74 (186)
T Consensus        43 FsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~-~i~~g~~-~D--viEida--asn~~VddIR~l~-e~v~~~P  115 (560)
T PRK06647         43 FSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCK-SIDNDSS-LD--VIEIDG--ASNTSVQDVRQIK-EEIMFPP  115 (560)
T ss_pred             EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHCCCC-CC--EEEECC--CCCCCHHHHHHHH-HHHCCCC
T ss_conf             32899878999999999996599999988887887888-8745999-87--576436--4548889999999-9863287


Q ss_pred             HHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             79982799889980387859889999999997195230100307898470156752274658878898876438999999
Q gi|254781026|r   75 GEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCAT  154 (186)
Q Consensus        75 G~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~  154 (186)
T Consensus       116 ---~~~~yKV~IIDEahmLt~~A~NALLKtLEEP-------------P~~~~FILaTte~--------------------  159 (560)
T PRK06647        116 ---ASSRYRVYIIDEVHMLSNSAFNALLKTIEEP-------------PPYIVFIFATTEV--------------------  159 (560)
T ss_pred             ---CCCCEEEEEECCHHHCCHHHHHHHHHHHHCC-------------CCCEEEEEECCCH--------------------
T ss_conf             ---6687069996465655999999999986348-------------8755999977994--------------------


Q ss_pred             HHHHHCCHHHHHCCCEEEECCCCC
Q ss_conf             998512243210042599838856
Q gi|254781026|r  155 EYQARISGPLMDRIDIRIAVPSRT  178 (186)
Q Consensus       155 ~Y~~rls~plldR~Dl~v~~~~~~  178 (186)
T Consensus       160 ---~KI~~TI~SRCQ-~f~Fk~i~  179 (560)
T PRK06647        160 ---HKLPATIKSRCQ-HFNFRLLS  179 (560)
T ss_pred             ---HHCHHHHHHHHE-EEECCCCC
T ss_conf             ---768489996510-41055599