HHsearch alignment for GI: 254781026 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.14 E-value=1.3e-05 Score=53.63 Aligned_cols=98 Identities=20% Similarity=0.247 Sum_probs=51.4
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCC-----CHHHHHHHHCEEECCCCCCCCCCCCCCCEEECC-CCCCCHHHCCCCCCCCCH
Q ss_conf 97778605999999988748898-----978853230000002788875653111202037-752100110234345682
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPL-----SLEESLEVSMIYSISGHSSHEYSFIQNRPFRSP-HHSVTIAALIGGGLQVLP 74 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l-----~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~-~~~~~~~~l~gg~~~~~p 74 (186)
T Consensus 43 F~GprGtGKts~Ari~AkaLnC~~~~~~~pC~~C~~C~-~i~~g~~~-D--viE---iDaasn~gVd~IR~i~~~v~~~P 115 (563)
T PRK06674 43 FSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCNECPSCL-GITNGSIS-D--VLE---IDAASNNGVDEIRDIRDKVKFAP 115 (563)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHCCCCC-C--EEE---ECCCCCCCHHHHHHHHHHHCCCC
T ss_conf 12899868999999999985799999988776687899-98558998-7--798---52555578799999999826488
Q ss_pred HHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCC
Q ss_conf 7998279988998038785988999999999719
Q gi|254781026|r 75 GEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETG 108 (186)
Q Consensus 75 G~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g 108 (186)
T Consensus 116 ---~~~~yKV~IIDeah~Lt~~A~NALLKtLEEP 146 (563)
T PRK06674 116 ---SAVEYKVYIIDEVHMLSIGAFNALLKTLEEP 146 (563)
T ss_pred ---CCCCEEEEEEECHHHCCHHHHHHHHHHHHCC
T ss_conf ---6787379998545637999999999986388