HHsearch alignment for GI: 254781026 and conserved domain: PRK06871
>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=96.43 E-value=0.0019 Score=40.96 Aligned_cols=96 Identities=15% Similarity=0.153 Sum_probs=50.8
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCH--HHHHHHH--CEEECCCCCCCCCCCCCCCEEECCCC----CCCHHHCCCCCCCC
Q ss_conf 9777860599999998874889897--8853230--00000278887565311120203775----21001102343456
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSL--EESLEVS--MIYSISGHSSHEYSFIQNRPFRSPHH----SVTIAALIGGGLQV 72 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~--~e~le~~--~i~s~~g~~~~~~~~~~~~p~~~~~~----~~~~~~l~gg~~~~ 72 (186)
T Consensus 28 ~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~sC~l~~~g~---------HPD~~~i~~~~~k~I~vd----~IR~l 94 (324)
T PRK06871 28 FKADSGLGTEQLIRALAQWLMCQAPGDEQPCGQCHSCHLFQAGN---------HPDFHILEPIDGKDIGVD----QVREI 94 (324)
T ss_pred EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC---------CCCEEEEECCCCCCCCHH----HHHHH
T ss_conf 68999978999999999998289999999888898999997389---------998799846788878899----99999
Q ss_pred CHHH---HHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCC
Q ss_conf 8279---982799889980387859889999999997195
Q gi|254781026|r 73 LPGE---DSLAHNGVLFLDEIPEFSPQTLNALRQPLETGE 109 (186)
Q Consensus 73 ~pG~---i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~ 109 (186)
T Consensus 95 ~~~~~~~~~~g~~KV~iI~~ae~m~~~AaNALLKtLEEPp 134 (324)
T PRK06871 95 NEKVSQFAQQGGNKVVYIQGAERLTEAAANALLKTLEEPR 134 (324)
T ss_pred HHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC
T ss_conf 9998646220596699975888857999999999833898