HHsearch alignment for GI: 254781026 and conserved domain: PRK06995
>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=93.53 E-value=0.034 Score=33.66 Aligned_cols=77 Identities=14% Similarity=0.273 Sum_probs=35.9
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCC--CCCHHHCCCCC--CCCCHHH
Q ss_conf 9777860599999998874889897885323000000278887565311120203775--21001102343--4568279
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHH--SVTIAALIGGG--LQVLPGE 76 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~--~~~~~~l~gg~--~~~~pG~ 76 (186)
T Consensus 181 lVGPTGVGKTTTiAKLAAr~---------------~l-~~g~~kVaLIT~DTYRIgAvEQLktYa~IlgvPv~vv~~~~e 244 (404)
T PRK06995 181 LVGPTGVGKTTTTAKLAARC---------------VM-RHGASKVALLTTDSYRIGGHEQLRIYGKILGVPVHAVKDAAD 244 (404)
T ss_pred EECCCCCCHHHHHHHHHHHH---------------HH-HHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHH
T ss_conf 86688876375899999999---------------99-838983799976875478999999999875955999599999
Q ss_pred H-----HHCCCCEEEEECHHHC
Q ss_conf 9-----8279988998038785
Q gi|254781026|r 77 D-----SLAHNGVLFLDEIPEF 93 (186)
Q Consensus 77 i-----~lAh~GVLflDE~~e~ 93 (186)
T Consensus 245 L~~aL~~l~~~dlILIDTaGrs 266 (404)
T PRK06995 245 LRLALAELRNKHIVLIDTVGMS 266 (404)
T ss_pred HHHHHHHHCCCCEEEEECCCCC
T ss_conf 9999997089999998099989