HHsearch alignment for GI: 254781026 and conserved domain: PRK06995

>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=93.53  E-value=0.034  Score=33.66  Aligned_cols=77  Identities=14%  Similarity=0.273  Sum_probs=35.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCC--CCCHHHCCCCC--CCCCHHH
Q ss_conf             9777860599999998874889897885323000000278887565311120203775--21001102343--4568279
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHH--SVTIAALIGGG--LQVLPGE   76 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~--~~~~~~l~gg~--~~~~pG~   76 (186)
T Consensus       181 lVGPTGVGKTTTiAKLAAr~---------------~l-~~g~~kVaLIT~DTYRIgAvEQLktYa~IlgvPv~vv~~~~e  244 (404)
T PRK06995        181 LVGPTGVGKTTTTAKLAARC---------------VM-RHGASKVALLTTDSYRIGGHEQLRIYGKILGVPVHAVKDAAD  244 (404)
T ss_pred             EECCCCCCHHHHHHHHHHHH---------------HH-HHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHH
T ss_conf             86688876375899999999---------------99-838983799976875478999999999875955999599999


Q ss_pred             H-----HHCCCCEEEEECHHHC
Q ss_conf             9-----8279988998038785
Q gi|254781026|r   77 D-----SLAHNGVLFLDEIPEF   93 (186)
Q Consensus        77 i-----~lAh~GVLflDE~~e~   93 (186)
T Consensus       245 L~~aL~~l~~~dlILIDTaGrs  266 (404)
T PRK06995        245 LRLALAELRNKHIVLIDTVGMS  266 (404)
T ss_pred             HHHHHHHHCCCCEEEEECCCCC
T ss_conf             9999997089999998099989