HHsearch alignment for GI: 254781026 and conserved domain: PRK07399
>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=96.52 E-value=0.0037 Score=39.31 Aligned_cols=67 Identities=19% Similarity=0.223 Sum_probs=41.3
Q ss_pred CCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCC------CCHHHH
Q ss_conf 79988998038785988999999999719523010030789847015675227465887889887643------899999
Q gi|254781026|r 80 AHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCI------RGPRCA 153 (186)
Q Consensus 80 Ah~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~------c~~~~~ 153 (186)
T Consensus 123 ~~~kVvII~~ae~m~~~AaNaLLKtLEEP~~------------~~fILit-~~~~~--lLpTI~SRCQ~i~F~~l~~~~i 187 (314)
T PRK07399 123 APRKVVVIEDAETMNEAAANALLKTLEEPGN------------GTLILIA-PSPES--LLPTIVSRCQIIPFYRLSDEQL 187 (314)
T ss_pred CCCEEEEECCHHHCCHHHHHHHHHHHCCCCC------------CEEEEEE-CCHHH--CCHHHHCCCEEEECCCCCHHHH
T ss_conf 8847999889787199999999986147878------------5699997-99364--9146641875633899899999
Q ss_pred HHHHHHCC
Q ss_conf 99985122
Q gi|254781026|r 154 TEYQARIS 161 (186)
Q Consensus 154 ~~Y~~rls 161 (186)
T Consensus 188 ~~~L~~~~ 195 (314)
T PRK07399 188 EQVLKRLG 195 (314)
T ss_pred HHHHHHCC
T ss_conf 99999716