HHsearch alignment for GI: 254781026 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=97.34 E-value=0.00021 Score=46.67 Aligned_cols=100 Identities=16% Similarity=0.231 Sum_probs=54.9
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHH----HHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHC--CCCCCCCCH
Q ss_conf 97778605999999988748898978----853230000002788875653111202037752100110--234345682
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLE----ESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAAL--IGGGLQVLP 74 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~----e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l--~gg~~~~~p 74 (186)
T Consensus 44 F~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~-~i~~g~hpD-v~~i--~p---~~~~i~id~iR~l~~~~~~~p 116 (395)
T PRK07940 44 FTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACR-TVLAGTHPD-VRVV--VP---EGLSIGVDEVREIVQIAARRP 116 (395)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHH-HHHCCCCCC-EEEE--EC---CCCCCCHHHHHHHHHHHHHCC
T ss_conf 3689987889999999999669999999998787899-987689987-1898--26---877688999999999985273
Q ss_pred HHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCE
Q ss_conf 799827998899803878598899999999971952
Q gi|254781026|r 75 GEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGEC 110 (186)
Q Consensus 75 G~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v 110 (186)
T Consensus 117 ---~~~~~kv~ii~~a~~m~~~a~NalLKtLEEPp~ 149 (395)
T PRK07940 117 ---TTGRWRIVVIEDADRLTERAANALLKAVEEPPP 149 (395)
T ss_pred ---CCCCCEEEEEECHHHHCHHHHHHHHHHHCCCCC
T ss_conf ---037955999807787489999999985217888