HHsearch alignment for GI: 254781026 and conserved domain: PRK07940

>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=97.34  E-value=0.00021  Score=46.67  Aligned_cols=100  Identities=16%  Similarity=0.231  Sum_probs=54.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHH----HHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHC--CCCCCCCCH
Q ss_conf             97778605999999988748898978----853230000002788875653111202037752100110--234345682
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLE----ESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAAL--IGGGLQVLP   74 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~----e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l--~gg~~~~~p   74 (186)
T Consensus        44 F~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~-~i~~g~hpD-v~~i--~p---~~~~i~id~iR~l~~~~~~~p  116 (395)
T PRK07940         44 FTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACR-TVLAGTHPD-VRVV--VP---EGLSIGVDEVREIVQIAARRP  116 (395)
T ss_pred             EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHH-HHHCCCCCC-EEEE--EC---CCCCCCHHHHHHHHHHHHHCC
T ss_conf             3689987889999999999669999999998787899-987689987-1898--26---877688999999999985273


Q ss_pred             HHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCE
Q ss_conf             799827998899803878598899999999971952
Q gi|254781026|r   75 GEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGEC  110 (186)
Q Consensus        75 G~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v  110 (186)
T Consensus       117 ---~~~~~kv~ii~~a~~m~~~a~NalLKtLEEPp~  149 (395)
T PRK07940        117 ---TTGRWRIVVIEDADRLTERAANALLKAVEEPPP  149 (395)
T ss_pred             ---CCCCCEEEEEECHHHHCHHHHHHHHHHHCCCCC
T ss_conf             ---037955999807787489999999985217888