HHsearch alignment for GI: 254781026 and conserved domain: PRK07993
>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=95.75 E-value=0.041 Score=33.21 Aligned_cols=93 Identities=18% Similarity=0.155 Sum_probs=50.6
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCH--HHHHHHH--CEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHH
Q ss_conf 9777860599999998874889897--8853230--00000278887565311120203775210011023434568279
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSL--EESLEVS--MIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGE 76 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~--~e~le~~--~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~ 76 (186)
T Consensus 29 ~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~~C~l~~~~~---------HPD~~~i~p---e----~~~~~I~Idq 92 (334)
T PRK07993 29 IQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT---------HPDYYTLTP---E----KGKSSLGVDA 92 (334)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC---------CCCEEEECC---C----CCCCCCCHHH
T ss_conf 47999988999999999998189999999999997899986689---------998477534---2----2345599999
Q ss_pred H--------H---HCCCCEEEEECHHHCCHHHHHHHHHHHHCCC
Q ss_conf 9--------8---2799889980387859889999999997195
Q gi|254781026|r 77 D--------S---LAHNGVLFLDEIPEFSPQTLNALRQPLETGE 109 (186)
Q Consensus 77 i--------~---lAh~GVLflDE~~e~~~~~l~~L~~~le~g~ 109 (186)
T Consensus 93 IR~l~~~~~~~~~~g~~kV~iI~~Ae~mn~~AaNaLLKtLEEPp 136 (334)
T PRK07993 93 VREVTEKLYEHARLGGAKVVWLPDAALLTDAAANALLKTLEEPP 136 (334)
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCC
T ss_conf 99999998436656994799976677759999999998612799