HHsearch alignment for GI: 254781026 and conserved domain: PRK08116
>PRK08116 hypothetical protein; Validated.
Probab=93.59 E-value=0.03 Score=33.95 Aligned_cols=125 Identities=17% Similarity=0.211 Sum_probs=63.6
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHH--HH
Q ss_conf 9777860599999998874889897885323000000278887565311120203775210011023434568279--98
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGE--DS 78 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~--i~ 78 (186)
T Consensus 113 l~G~~GtGKThLa~aIa~~l~--------~-------~g~---~V~~~~~~~-----ll~~lk~~~~~~~~~~~~e~l~~ 169 (262)
T PRK08116 113 LWGSPGNGKTYLAAAIANELI--------E-------KGV---PVVFVNVPE-----LLNRIKSTYNSEGKEDENEIIRA 169 (262)
T ss_pred EECCCCCCHHHHHHHHHHHHH--------H-------CCC---EEEEEEHHH-----HHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 989899989999999999999--------8-------799---399988999-----99999999863561019999998
Q ss_pred HCCCCEEEEECHHH--CCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 27998899803878--5988999999999719523010030789847015675227465887889887643899999999
Q gi|254781026|r 79 LAHNGVLFLDEIPE--FSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEY 156 (186)
Q Consensus 79 lAh~GVLflDE~~e--~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y 156 (186)
T Consensus 170 l~~~dLLIiDDlG~e~~t~w~~e~lf~IIn~Ry~------------~~kptIiTTNl~~---------------~e---L 219 (262)
T PRK08116 170 LDNADLLILDDLGAEKDTEWVREKLYNIIDSRYR------------KGLPTIFTTNLSL---------------EE---L 219 (262)
T ss_pred HHCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHH------------CCCCEEEECCCCH---------------HH---H
T ss_conf 6129989983221456987899999999999997------------6999899879999---------------99---9
Q ss_pred HHHCCHHHHHCC-CEE--EECCCCC
Q ss_conf 851224321004-259--9838856
Q gi|254781026|r 157 QARISGPLMDRI-DIR--IAVPSRT 178 (186)
Q Consensus 157 ~~rls~plldR~-Dl~--v~~~~~~ 178 (186)
T Consensus 220 ~~~~~~Ri~sRl~e~~~~v~~~G~d 244 (262)
T PRK08116 220 KNQYGKRTYSRILEMCTPVKNEGKS 244 (262)
T ss_pred HHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf 9986379999998677899851778