HHsearch alignment for GI: 254781026 and conserved domain: PRK08116

>PRK08116 hypothetical protein; Validated.
Probab=93.59  E-value=0.03  Score=33.95  Aligned_cols=125  Identities=17%  Similarity=0.211  Sum_probs=63.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHH--HH
Q ss_conf             9777860599999998874889897885323000000278887565311120203775210011023434568279--98
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGE--DS   78 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~--i~   78 (186)
T Consensus       113 l~G~~GtGKThLa~aIa~~l~--------~-------~g~---~V~~~~~~~-----ll~~lk~~~~~~~~~~~~e~l~~  169 (262)
T PRK08116        113 LWGSPGNGKTYLAAAIANELI--------E-------KGV---PVVFVNVPE-----LLNRIKSTYNSEGKEDENEIIRA  169 (262)
T ss_pred             EECCCCCCHHHHHHHHHHHHH--------H-------CCC---EEEEEEHHH-----HHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             989899989999999999999--------8-------799---399988999-----99999999863561019999998


Q ss_pred             HCCCCEEEEECHHH--CCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             27998899803878--5988999999999719523010030789847015675227465887889887643899999999
Q gi|254781026|r   79 LAHNGVLFLDEIPE--FSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEY  156 (186)
Q Consensus        79 lAh~GVLflDE~~e--~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y  156 (186)
T Consensus       170 l~~~dLLIiDDlG~e~~t~w~~e~lf~IIn~Ry~------------~~kptIiTTNl~~---------------~e---L  219 (262)
T PRK08116        170 LDNADLLILDDLGAEKDTEWVREKLYNIIDSRYR------------KGLPTIFTTNLSL---------------EE---L  219 (262)
T ss_pred             HHCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHH------------CCCCEEEECCCCH---------------HH---H
T ss_conf             6129989983221456987899999999999997------------6999899879999---------------99---9


Q ss_pred             HHHCCHHHHHCC-CEE--EECCCCC
Q ss_conf             851224321004-259--9838856
Q gi|254781026|r  157 QARISGPLMDRI-DIR--IAVPSRT  178 (186)
Q Consensus       157 ~~rls~plldR~-Dl~--v~~~~~~  178 (186)
T Consensus       220 ~~~~~~Ri~sRl~e~~~~v~~~G~d  244 (262)
T PRK08116        220 KNQYGKRTYSRILEMCTPVKNEGKS  244 (262)
T ss_pred             HHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf             9986379999998677899851778