HHsearch alignment for GI: 254781026 and conserved domain: PRK08154
>PRK08154 anaerobic benzoate catabolism transcriptional regulator; Reviewed.
Probab=92.80 E-value=0.055 Score=32.44 Aligned_cols=87 Identities=26% Similarity=0.348 Sum_probs=43.1
Q ss_pred CCCCCCCHHHHHHHHHHHHC--CCCCHHHHHH------HHCEEECCCCCCCCCCCCCCCEEEC-CCCCCCHHHCCCCCCC
Q ss_conf 97778605999999988748--8989788532------3000000278887565311120203-7752100110234345
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSIL--LPLSLEESLE------VSMIYSISGHSSHEYSFIQNRPFRS-PHHSVTIAALIGGGLQ 71 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iL--P~l~~~e~le------~~~i~s~~g~~~~~~~~~~~~p~~~-~~~~~~~~~l~gg~~~ 71 (186)
T Consensus 138 LIGlmGaGKSTvGr~LA~~Lg~pFvDlD~~IEk~aG~sI~eIFa~~GE~~FR~~E--~~~L~~ll~~~~~~VIAtGGGiV 215 (304)
T PRK08154 138 LIGLRGAGKSTLGRMLAARLGVPFVELNREIEREAGLSVSEIFALYGQEGYRRLE--RRALERLIAEHEEMVLATGGGIV 215 (304)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHCCCHHHHHHHHCHHHHHHHH--HHHHHHHHHCCCCEEEEECCCCC
T ss_conf 8899999888999999999598977877999999299999999986889999999--99999987116998997287212
Q ss_pred CCHHHH--HHCCCCEEEEEC
Q ss_conf 682799--827998899803
Q gi|254781026|r 72 VLPGED--SLAHNGVLFLDE 89 (186)
Q Consensus 72 ~~pG~i--~lAh~GVLflDE 89 (186)
T Consensus 216 ~~~~n~~~L~~~g~vVwL~a 235 (304)
T PRK08154 216 SEPATFDLLLSHCYTVWLKA 235 (304)
T ss_pred CCHHHHHHHHHCCEEEEEEC
T ss_conf 78899999996898999979