HHsearch alignment for GI: 254781026 and conserved domain: PRK08181

>PRK08181 transposase; Validated.
Probab=97.51  E-value=5.4e-05  Score=50.09  Aligned_cols=118  Identities=19%  Similarity=0.180  Sum_probs=63.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCC-HHHCCCCCCCCCHHHHHH
Q ss_conf             9777860599999998874889897885323000000278887565311120203775210-011023434568279982
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVT-IAALIGGGLQVLPGEDSL   79 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~-~~~l~gg~~~~~pG~i~l   79 (186)
T Consensus       111 l~Gp~GtGKThLA~Alg~~--------A~~~-------G~---~V~f~-----~~~~L~~~L~~a~~~~~--~~~~~~~l  165 (269)
T PRK08181        111 LFGPPGGGKSHLAAAIGLA--------LIEN-------GW---RVLFT-----RTTDLVQKLQVARRELQ--LESAIAKL  165 (269)
T ss_pred             EECCCCCCHHHHHHHHHHH--------HHHC-------CC---EEEEE-----EHHHHHHHHHHHHHCCC--HHHHHHHH
T ss_conf             9899998788999999999--------9987-------99---39997-----89999999999775583--99999997


Q ss_pred             CCCCEEEEECHHH--CCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             7998899803878--59889999999997195230100307898470156752274658878898876438999999998
Q gi|254781026|r   80 AHNGVLFLDEIPE--FSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQ  157 (186)
Q Consensus        80 Ah~GVLflDE~~e--~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~  157 (186)
T Consensus       166 ~~~dLLIiDe~G~~~~~~~~~~~lf~lI~~Rye---~----------~S~IITSn~~~~~W~~~f~D-------------  219 (269)
T PRK08181        166 DKFDLLILDDLAYVTKDQAETSVLFELISARYE---R----------RSILITANQPFGEWNRVFPD-------------  219 (269)
T ss_pred             HCCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHC---C----------CCEEEECCCCHHHHHHHCCC-------------
T ss_conf             444601220105667998999999999999857---8----------88899889997788775386-------------


Q ss_pred             HHCCHHHHHCCC
Q ss_conf             512243210042
Q gi|254781026|r  158 ARISGPLMDRID  169 (186)
Q Consensus       158 ~rls~plldR~D  169 (186)
T Consensus       220 ~~la~AiLDRLv  231 (269)
T PRK08181        220 PAMTLAAVDRLV  231 (269)
T ss_pred             HHHHHHHHHHHH
T ss_conf             889999999870