HHsearch alignment for GI: 254781026 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=97.51 E-value=5.4e-05 Score=50.09 Aligned_cols=118 Identities=19% Similarity=0.180 Sum_probs=63.1
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCC-HHHCCCCCCCCCHHHHHH
Q ss_conf 9777860599999998874889897885323000000278887565311120203775210-011023434568279982
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVT-IAALIGGGLQVLPGEDSL 79 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~-~~~l~gg~~~~~pG~i~l 79 (186)
T Consensus 111 l~Gp~GtGKThLA~Alg~~--------A~~~-------G~---~V~f~-----~~~~L~~~L~~a~~~~~--~~~~~~~l 165 (269)
T PRK08181 111 LFGPPGGGKSHLAAAIGLA--------LIEN-------GW---RVLFT-----RTTDLVQKLQVARRELQ--LESAIAKL 165 (269)
T ss_pred EECCCCCCHHHHHHHHHHH--------HHHC-------CC---EEEEE-----EHHHHHHHHHHHHHCCC--HHHHHHHH
T ss_conf 9899998788999999999--------9987-------99---39997-----89999999999775583--99999997
Q ss_pred CCCCEEEEECHHH--CCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 7998899803878--59889999999997195230100307898470156752274658878898876438999999998
Q gi|254781026|r 80 AHNGVLFLDEIPE--FSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQ 157 (186)
Q Consensus 80 Ah~GVLflDE~~e--~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~ 157 (186)
T Consensus 166 ~~~dLLIiDe~G~~~~~~~~~~~lf~lI~~Rye---~----------~S~IITSn~~~~~W~~~f~D------------- 219 (269)
T PRK08181 166 DKFDLLILDDLAYVTKDQAETSVLFELISARYE---R----------RSILITANQPFGEWNRVFPD------------- 219 (269)
T ss_pred HCCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHC---C----------CCEEEECCCCHHHHHHHCCC-------------
T ss_conf 444601220105667998999999999999857---8----------88899889997788775386-------------
Q ss_pred HHCCHHHHHCCC
Q ss_conf 512243210042
Q gi|254781026|r 158 ARISGPLMDRID 169 (186)
Q Consensus 158 ~rls~plldR~D 169 (186)
T Consensus 220 ~~la~AiLDRLv 231 (269)
T PRK08181 220 PAMTLAAVDRLV 231 (269)
T ss_pred HHHHHHHHHHHH
T ss_conf 889999999870