HHsearch alignment for GI: 254781026 and conserved domain: PRK08451
>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.43 E-value=0.0001 Score=48.47 Aligned_cols=99 Identities=21% Similarity=0.250 Sum_probs=50.9
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCC-----CHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHH
Q ss_conf 97778605999999988748898-----9788532300000027888756531112020377521001102343456827
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPL-----SLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPG 75 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l-----~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG 75 (186)
T Consensus 41 FsGPrGvGKTt~ArifAkaLnC~~~~~~~PCg~C~sC~-~i~~g~hp-D--ViEiDa-asn~gID~IReLie-~~~~~P- 113 (523)
T PRK08451 41 FSGLRGSGKTSSARIFSRALVCEQGPSSTPCGTCAQCQ-AALEGRHI-D--IIEMDA-ASNRGIDDIRNLIE-QTKYKP- 113 (523)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHCCCCC-C--EEEECC-CCCCCHHHHHHHHH-HHCCCC-
T ss_conf 57899868899999999997599999989888788899-98648999-8--551055-33368999999999-723588-
Q ss_pred HHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCC
Q ss_conf 998279988998038785988999999999719
Q gi|254781026|r 76 EDSLAHNGVLFLDEIPEFSPQTLNALRQPLETG 108 (186)
Q Consensus 76 ~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g 108 (186)
T Consensus 114 --~~gryKV~IIDEah~Lt~~A~NALLKTLEEP 144 (523)
T PRK08451 114 --SMARFKIFIIDEVHMLTKEAFNALLKTLEEP 144 (523)
T ss_pred --CCCCEEEEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf --6797279998260304899999999970389