HHsearch alignment for GI: 254781026 and conserved domain: PRK08691
>PRK08691 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.26 E-value=0.00034 Score=45.41 Aligned_cols=100 Identities=18% Similarity=0.194 Sum_probs=53.0
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC-----HHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCC-CCHHHCCCCCCCCCH
Q ss_conf 977786059999999887488989-----78853230000002788875653111202037752-100110234345682
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS-----LEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHS-VTIAALIGGGLQVLP 74 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~-----~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~-~~~~~l~gg~~~~~p 74 (186)
T Consensus 43 f~G~rGvGKTt~Ari~Ak~lNC~~~~~~~pCg~C~~C~-~i~~g~~~-D--~~Ei--DaAs~~~vdd~R~l~~-~~~y~P 115 (704)
T PRK08691 43 LTGTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCT-QIDAGRYV-D--LLEI--DAASNTGIDNIREVLE-NAQYAP 115 (704)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHCCCCC-C--EEEE--ECCCCCCHHHHHHHHH-HCCCCC
T ss_conf 02789878889999999996799999999787777678-78558998-7--4774--2454458899999998-534688
Q ss_pred HHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCE
Q ss_conf 799827998899803878598899999999971952
Q gi|254781026|r 75 GEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGEC 110 (186)
Q Consensus 75 G~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v 110 (186)
T Consensus 116 ---~~~~yKVyiiDEvhmLs~~afNAlLKtLEEPP~ 148 (704)
T PRK08691 116 ---TAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPE 148 (704)
T ss_pred ---CCCCEEEEEEECHHHCCHHHHHHHHHHHCCCCC
T ss_conf ---678535999831544389999999986147975