HHsearch alignment for GI: 254781026 and conserved domain: PRK08699

>PRK08699 DNA polymerase III subunit delta'; Validated.
Probab=96.13  E-value=0.018  Score=35.22  Aligned_cols=98  Identities=17%  Similarity=0.115  Sum_probs=52.3

Q ss_pred             CCCCCCCHHHHHHHHHHHHCC---CCCHHHH---HHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCC--CC
Q ss_conf             977786059999999887488---9897885---323000000278887565311120203775210011023434--56
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILL---PLSLEES---LEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGL--QV   72 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP---~l~~~e~---le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~--~~   72 (186)
T Consensus        26 ~~Gp~G~Gk~~~A~~~A~~llC~~~~~~~~~Cg~C~sC~~-~~~g~---------HPD~~~i~p~~~~--~~~g~~~~~I   93 (325)
T PRK08699         26 FVGKKGTGKTAFARFAAKALLCETPAPGCKPCGECMSCHL-FGQGS---------HPDFYEITPLADE--PENGRKLLQI   93 (325)
T ss_pred             EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HHCCC---------CCCEEEEECCCCC--CCCCCCCCCC
T ss_conf             5799997899999999999828999888998988888999-86599---------9996885134453--0016655667


Q ss_pred             CHHH-------HH----HCCCCEEEEECHHHCCHHHHHHHHHHHHCCCE
Q ss_conf             8279-------98----27998899803878598899999999971952
Q gi|254781026|r   73 LPGE-------DS----LAHNGVLFLDEIPEFSPQTLNALRQPLETGEC  110 (186)
Q Consensus        73 ~pG~-------i~----lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v  110 (186)
T Consensus        94 ~idqiR~l~~~~~~~~~~~~~kV~ii~~ae~mn~~aaNaLLK~LEEPp~  142 (325)
T PRK08699         94 KIDAVREIIDNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPP  142 (325)
T ss_pred             CHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCC
T ss_conf             6999999999971086568946999857777589999999998417888