HHsearch alignment for GI: 254781026 and conserved domain: PRK08699
>PRK08699 DNA polymerase III subunit delta'; Validated.
Probab=96.13 E-value=0.018 Score=35.22 Aligned_cols=98 Identities=17% Similarity=0.115 Sum_probs=52.3
Q ss_pred CCCCCCCHHHHHHHHHHHHCC---CCCHHHH---HHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCC--CC
Q ss_conf 977786059999999887488---9897885---323000000278887565311120203775210011023434--56
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILL---PLSLEES---LEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGL--QV 72 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP---~l~~~e~---le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~--~~ 72 (186)
T Consensus 26 ~~Gp~G~Gk~~~A~~~A~~llC~~~~~~~~~Cg~C~sC~~-~~~g~---------HPD~~~i~p~~~~--~~~g~~~~~I 93 (325)
T PRK08699 26 FVGKKGTGKTAFARFAAKALLCETPAPGCKPCGECMSCHL-FGQGS---------HPDFYEITPLADE--PENGRKLLQI 93 (325)
T ss_pred EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HHCCC---------CCCEEEEECCCCC--CCCCCCCCCC
T ss_conf 5799997899999999999828999888998988888999-86599---------9996885134453--0016655667
Q ss_pred CHHH-------HH----HCCCCEEEEECHHHCCHHHHHHHHHHHHCCCE
Q ss_conf 8279-------98----27998899803878598899999999971952
Q gi|254781026|r 73 LPGE-------DS----LAHNGVLFLDEIPEFSPQTLNALRQPLETGEC 110 (186)
Q Consensus 73 ~pG~-------i~----lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v 110 (186)
T Consensus 94 ~idqiR~l~~~~~~~~~~~~~kV~ii~~ae~mn~~aaNaLLK~LEEPp~ 142 (325)
T PRK08699 94 KIDAVREIIDNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPP 142 (325)
T ss_pred CHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCC
T ss_conf 6999999999971086568946999857777589999999998417888