HHsearch alignment for GI: 254781026 and conserved domain: PRK08770
>PRK08770 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.01 E-value=0.00079 Score=43.23 Aligned_cols=110 Identities=18% Similarity=0.193 Sum_probs=58.3
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCC-----CHHHHHHHHCEEECCCCCCCCCCCCCCCEEECC-C-CCCCHHHCCC-CCCCC
Q ss_conf 97778605999999988748898-----978853230000002788875653111202037-7-5210011023-43456
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPL-----SLEESLEVSMIYSISGHSSHEYSFIQNRPFRSP-H-HSVTIAALIG-GGLQV 72 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l-----~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~-~-~~~~~~~l~g-g~~~~ 72 (186)
T Consensus 43 f~g~rg~gkt~~ar~~a~~lnc~~~~~~~pc~~c~~c~-~i~~~~--~~d-~~---e~daas~~~v~~~r~~~~~~~~~p 115 (663)
T PRK08770 43 FTGTRGVGKTTIARIFAKSLNCETGTSADPCGQCPACL-DIDAGR--YID-LL---EIDAASNTGVDDVREVIENAQYMP 115 (663)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHCCC--CCC-EE---EEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 22799888889999999986789999999787787789-885489--886-58---864676588899999998443588
Q ss_pred CHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCC
Q ss_conf 82799827998899803878598899999999971952301003078984701567522746
Q gi|254781026|r 73 LPGEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPC 134 (186)
Q Consensus 73 ~pG~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPc 134 (186)
T Consensus 116 -----~~~~~kvy~idevhmls~~~fna~lktleepp~~v-----------~f-~~att~~~ 160 (663)
T PRK08770 116 -----SRGKFKVYLIDEVHMLSKAAFNALLKTLEEPPEHV-----------KF-LLATTDPQ 160 (663)
T ss_pred -----CCCCEEEEEEECHHHCCHHHHHHHHHHHCCCCCCE-----------EE-EEECCCHH
T ss_conf -----77743699970043328999999987402786442-----------89-98548733