HHsearch alignment for GI: 254781026 and conserved domain: PRK08853
>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.53 E-value=8.6e-05 Score=48.89 Aligned_cols=97 Identities=18% Similarity=0.178 Sum_probs=50.9
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHH-----HHHHHCEEECCCCCCCCCCCCCCCEEECC-CC-CCCHHHCCCCCCCCC
Q ss_conf 977786059999999887488989788-----53230000002788875653111202037-75-210011023434568
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEE-----SLEVSMIYSISGHSSHEYSFIQNRPFRSP-HH-SVTIAALIGGGLQVL 73 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e-----~le~~~i~s~~g~~~~~~~~~~~~p~~~~-~~-~~~~~~l~gg~~~~~ 73 (186)
T Consensus 43 f~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~-~i~~g~~--~-d~~---EiDaAs~~~vdd~rel~~~-~~y~ 114 (717)
T PRK08853 43 FSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCK-EIDEGRF--V-DLL---EIDAASRTKVEDTRELLDN-VQYK 114 (717)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH-HHHCCCC--C-CEE---EECCCCCCCHHHHHHHHHH-CCCC
T ss_conf 10889888989999999986789999999788870267-6744787--7-524---5405656788999999985-5548
Q ss_pred HHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCC
Q ss_conf 27998279988998038785988999999999719
Q gi|254781026|r 74 PGEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETG 108 (186)
Q Consensus 74 pG~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g 108 (186)
T Consensus 115 p---~~~~yKvyiiDEvHmls~~afnAlLKtlEEP 146 (717)
T PRK08853 115 P---ARGRFKVYLIDEVHMLSRHSFNALLKTLEEP 146 (717)
T ss_pred C---CCCCEEEEEEECHHHCCHHHHHHHHHHHCCC
T ss_conf 8---7785479998305443899999998760378