HHsearch alignment for GI: 254781026 and conserved domain: PRK10365
>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=99.23 E-value=1.2e-11 Score=89.04 Aligned_cols=106 Identities=26% Similarity=0.365 Sum_probs=78.9
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCC-----CCCHHHCCC-------C
Q ss_conf 9777860599999998874889897885323000000278887565311120203775-----210011023-------4
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHH-----SVTIAALIG-------G 68 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~-----~~~~~~l~g-------g 68 (186)
T Consensus 167 I~GE~GTGK~~~Ar~IH~~S~r--------------------~~------~pfv~vnC~~l~~~l~eseLFG~~~gaftg 220 (441)
T PRK10365 167 IHGDSGTGKELVARAIHASSAR--------------------SE------KPLVTLNCAALNESLLESELFGHEKGAFTG 220 (441)
T ss_pred EECCCCHHHHHHHHHHHHCCCC--------------------CC------CCCEEEECCCCCHHHHHHHHCCCCCCCCCC
T ss_conf 9899981099999999965787--------------------78------980798789898455589861775568789
Q ss_pred CCCCCHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCC
Q ss_conf 345682799827998899803878598899999999971952301003078984701567522746
Q gi|254781026|r 69 GLQVLPGEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPC 134 (186)
Q Consensus 69 ~~~~~pG~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPc 134 (186)
T Consensus 221 a~~~~~g~~~~A~gGTLfLdeI~~l~~~~Q~kLl~~l~~~~~--~~~g~~~~~~~d~RiIaat~~~ 284 (441)
T PRK10365 221 ADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREV--QRVGSNQTISVDVRLIAATHRD 284 (441)
T ss_pred CCCCCCCCEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHH--CCCCCCCEEECCCEEEECCCCC
T ss_conf 653468987788998255023152999999999987775210--0058873441363799837889