HHsearch alignment for GI: 254781026 and conserved domain: PRK10820
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional.
Probab=99.40 E-value=7.1e-13 Score=96.30 Aligned_cols=104 Identities=22% Similarity=0.286 Sum_probs=82.2
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCC-----CCCCHHHCCCCCCCCCHHH
Q ss_conf 77786059999999887488989788532300000027888756531112020377-----5210011023434568279
Q gi|254781026|r 2 IGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPH-----HSVTIAALIGGGLQVLPGE 76 (186)
Q Consensus 2 ~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~-----~~~~~~~l~gg~~~~~pG~ 76 (186)
T Consensus 233 ~GEsGTGKellAraIH~~S~R--------------------~~------~pFv~vnC~alp~~l~eseLFG~a~~~~~G~ 286 (513)
T PRK10820 233 TGDTGTGKDLFAYACHLASPR--------------------AK------KPYLALNCASIPEDAVESELFGHAPEGKKGF 286 (513)
T ss_pred ECCCCCCHHHHHHHHHHCCCC--------------------CC------CCCEEEECCCCCHHHHHHHHCCCCCCCCCCC
T ss_conf 898982499999999966887--------------------89------9826888998996789998638766688975
Q ss_pred HHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCC
Q ss_conf 982799889980387859889999999997195230100307898470156752274
Q gi|254781026|r 77 DSLAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNP 133 (186)
Q Consensus 77 i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NP 133 (186)
T Consensus 287 fe~A~gGTLfLdEI~~l~~~~Q~kLLr~Lq~~~~--~rvG~~~~~~~dvRiIaaT~~ 341 (513)
T PRK10820 287 FEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTF--RRVGEDHEVHVDVRVICATQK 341 (513)
T ss_pred EEECCCCEEEEECHHHCCHHHHHHHHHHHHCCEE--EECCCCCEEEEEEEEEECCCH
T ss_conf 5785898899978365999999999999868979--965998535677899962653