HHsearch alignment for GI: 254781026 and conserved domain: PRK11034

>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional.
Probab=98.22  E-value=1.7e-06  Score=58.85  Aligned_cols=96  Identities=24%  Similarity=0.393  Sum_probs=58.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCC-----C----
Q ss_conf             9777860599999998874889897885323000000278887565311120203775210011023434-----5----
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGL-----Q----   71 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~-----~----   71 (186)
T Consensus       212 LvGepGVGKTAIvEGLA~rI~~g~VP~~L~~~~i~~Ld-----------------------l~~LiAGtkyRGefEeRlk  268 (758)
T PRK11034        212 LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD-----------------------IGSLLAGTKYRGDFEKRFK  268 (758)
T ss_pred             EECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEE-----------------------HHHHHCCCCCCHHHHHHHH
T ss_conf             21699986999999999999738997655898899845-----------------------8778616864154999999


Q ss_pred             CCHHHHHHCCCCEEEEECHHHC---------CHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCC
Q ss_conf             6827998279988998038785---------98899999999971952301003078984701567522746
Q gi|254781026|r   72 VLPGEDSLAHNGVLFLDEIPEF---------SPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPC  134 (186)
Q Consensus        72 ~~pG~i~lAh~GVLflDE~~e~---------~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPc  134 (186)
T Consensus       269 ~vi~e~~~~~~~ILFIDEiH~ivGaG~~~gg~~DaaNlLKP~LarG~l---------------~~IgaTT~~  325 (758)
T PRK11034        269 ALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI---------------RVIGSTTYQ  325 (758)
T ss_pred             HHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC---------------EEEEECCHH
T ss_conf             999999857985999804344226887677764678874578746972---------------399943779