HHsearch alignment for GI: 254781026 and conserved domain: PRK13537
>PRK13537 lipooligosaccharide transporter ATP-binding subunit; Provisional.
Probab=92.89 E-value=0.049 Score=32.70 Aligned_cols=24 Identities=29% Similarity=0.474 Sum_probs=21.6
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 36 llGpNGAGKTTli~~l~Gl~~p~s 59 (304)
T PRK13537 36 LLGPNGAGKTTTLKMLLGLTHPDA 59 (304)
T ss_pred EECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 999989729999999977956897