HHsearch alignment for GI: 254781026 and conserved domain: PRK13826

>PRK13826 Dtr system oriT relaxase; Provisional.
Probab=92.15  E-value=0.12  Score=30.54  Aligned_cols=91  Identities=21%  Similarity=0.294  Sum_probs=51.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCC---CCCCCCEEECCCCCCCHHHCCCCCCCCCHHHH
Q ss_conf             977786059999999887488989788532300000027888756---53111202037752100110234345682799
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEY---SFIQNRPFRSPHHSVTIAALIGGGLQVLPGED   77 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~---~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i   77 (186)
T Consensus       402 VvG~AGaGKStmL~aARea---------wEa~G-yrV~GaALsGkAAegLe~~sGI----~SrTlAs~---e~~w~~gr~  464 (1102)
T PRK13826        402 VIGRAGAGKTTMMKAAREA---------WEAAG-YRVVGGALAGKAAEGLEKEAGI----ASRTLSSW---ELRWNQGRD  464 (1102)
T ss_pred             EEECCCCCHHHHHHHHHHH---------HHHCC-CEEEEECCCHHHHHHHHHCCCC----CCHHHHHH---HHHHCCCCC
T ss_conf             9842888788999999999---------99779-7798015007899977534695----30338999---987435865


Q ss_pred             HHCCCCEEEEECHHHCCHHHHHHHHHHHHCC
Q ss_conf             8279988998038785988999999999719
Q gi|254781026|r   78 SLAHNGVLFLDEIPEFSPQTLNALRQPLETG  108 (186)
Q Consensus        78 ~lAh~GVLflDE~~e~~~~~l~~L~~~le~g  108 (186)
T Consensus       465 ~L~~~dVlVIDEAGMVgsrqmarvl~~ae~a  495 (1102)
T PRK13826        465 QLDNKTVFVLDEAGMVSSRQMALFVEAVTRA  495 (1102)
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf             5678738998455565579999999999975