HHsearch alignment for GI: 254781026 and conserved domain: TIGR02653

>TIGR02653 Lon_rel_chp conserved hypothetical protein; InterPro: IPR013473 This entry describes a protein family of unknown function, about 690 residues in length, in which some members show C-terminal sequence similarity to IPR008269 from INTERPRO, which is the Lon protease C-terminal proteolytic domain, from MEROPS family S16. However, the annotated catalytic sites of Escherichia coli Lon protease are not conserved in members of this family. Members have a motif GP[RK][GS]TGKS, similar to the ATP-binding P-loop motif GxxGxGK[ST]..
Probab=94.22  E-value=0.021  Score=34.86  Aligned_cols=129  Identities=21%  Similarity=0.227  Sum_probs=84.5

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHCC
Q ss_conf             77786059999999887488989788532300000027888756531112020377521001102343456827998279
Q gi|254781026|r    2 IGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSLAH   81 (186)
Q Consensus         2 ~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~lAh   81 (186)
T Consensus       224 LGPrgTGKShvYkE~-------------------------SPn~iL-------~sGGqTTVANLFyN~str~~GLVG~WD  271 (677)
T TIGR02653       224 LGPRGTGKSHVYKEL-------------------------SPNSIL-------MSGGQTTVANLFYNMSTRQIGLVGLWD  271 (677)
T ss_pred             ECCCCCCCCEEEECC-------------------------CCCEEE-------ECCCCHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             478898734054135-------------------------842122-------058843567766654216302033001


Q ss_pred             CCEEEEECHH---HCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             9889980387---8598899999999971952301003078984701567522746588788988764389999999985
Q gi|254781026|r   82 NGVLFLDEIP---EFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQA  158 (186)
Q Consensus        82 ~GVLflDE~~---e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~~  158 (186)
T Consensus       272 --vVAFDEVAgi~fkdKdgv~imKdYmaSG--SFARGkes~~g~ASivfvGN~NQ-~vEtlvKtSHLf~PfP~a~~----  342 (677)
T TIGR02653       272 --VVAFDEVAGIEFKDKDGVQIMKDYMASG--SFARGKESIEGKASIVFVGNINQ-SVETLVKTSHLFAPFPEAMR----  342 (677)
T ss_pred             --EEEEEEECCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCCEEEEEECCCCC-CHHHHHHHHHHCCCCHHHHH----
T ss_conf             --2531000487204863103433542047--85345346355334899857786-15788877653044068874----


Q ss_pred             HCCHHHHHCCCEEE
Q ss_conf             12243210042599
Q gi|254781026|r  159 RISGPLMDRIDIRI  172 (186)
Q Consensus       159 rls~plldR~Dl~v  172 (186)
T Consensus       343 -~DtAFfDR~H~Yi  355 (677)
T TIGR02653       343 -EDTAFFDRIHYYI  355 (677)
T ss_pred             -HHHHHHHHHHCCC
T ss_conf             -1025675563058