HHsearch alignment for GI: 254781026 and conserved domain: TIGR02653
>TIGR02653 Lon_rel_chp conserved hypothetical protein; InterPro: IPR013473 This entry describes a protein family of unknown function, about 690 residues in length, in which some members show C-terminal sequence similarity to IPR008269 from INTERPRO, which is the Lon protease C-terminal proteolytic domain, from MEROPS family S16. However, the annotated catalytic sites of Escherichia coli Lon protease are not conserved in members of this family. Members have a motif GP[RK][GS]TGKS, similar to the ATP-binding P-loop motif GxxGxGK[ST]..
Probab=94.22 E-value=0.021 Score=34.86 Aligned_cols=129 Identities=21% Similarity=0.227 Sum_probs=84.5
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHCC
Q ss_conf 77786059999999887488989788532300000027888756531112020377521001102343456827998279
Q gi|254781026|r 2 IGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSLAH 81 (186)
Q Consensus 2 ~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~lAh 81 (186)
T Consensus 224 LGPrgTGKShvYkE~-------------------------SPn~iL-------~sGGqTTVANLFyN~str~~GLVG~WD 271 (677)
T TIGR02653 224 LGPRGTGKSHVYKEL-------------------------SPNSIL-------MSGGQTTVANLFYNMSTRQIGLVGLWD 271 (677)
T ss_pred ECCCCCCCCEEEECC-------------------------CCCEEE-------ECCCCHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 478898734054135-------------------------842122-------058843567766654216302033001
Q ss_pred CCEEEEECHH---HCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9889980387---8598899999999971952301003078984701567522746588788988764389999999985
Q gi|254781026|r 82 NGVLFLDEIP---EFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQA 158 (186)
Q Consensus 82 ~GVLflDE~~---e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~~ 158 (186)
T Consensus 272 --vVAFDEVAgi~fkdKdgv~imKdYmaSG--SFARGkes~~g~ASivfvGN~NQ-~vEtlvKtSHLf~PfP~a~~---- 342 (677)
T TIGR02653 272 --VVAFDEVAGIEFKDKDGVQIMKDYMASG--SFARGKESIEGKASIVFVGNINQ-SVETLVKTSHLFAPFPEAMR---- 342 (677)
T ss_pred --EEEEEEECCCCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCCEEEEEECCCCC-CHHHHHHHHHHCCCCHHHHH----
T ss_conf --2531000487204863103433542047--85345346355334899857786-15788877653044068874----
Q ss_pred HCCHHHHHCCCEEE
Q ss_conf 12243210042599
Q gi|254781026|r 159 RISGPLMDRIDIRI 172 (186)
Q Consensus 159 rls~plldR~Dl~v 172 (186)
T Consensus 343 -~DtAFfDR~H~Yi 355 (677)
T TIGR02653 343 -EDTAFFDRIHYYI 355 (677)
T ss_pred -HHHHHHHHHHCCC
T ss_conf -1025675563058