HHsearch alignment for GI: 254781026 and conserved domain: TIGR02858

>TIGR02858 spore_III_AA stage III sporulation protein AA; InterPro: IPR014217 Proteins in this entry include the stage III sporulation protein AA that is encoded by one of several genes in the spoIIIA locus. This protein is only found in species that are capable of endospore formation..
Probab=96.84  E-value=0.0013  Score=41.94  Aligned_cols=96  Identities=23%  Similarity=0.313  Sum_probs=54.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCC------------HHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCC
Q ss_conf             977786059999999887488989------------78853230000002788875653111202037752100110234
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLS------------LEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGG   68 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~------------~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg   68 (186)
T Consensus       128 iIsPPq~GKTTlLRDlaR~~StG~~~~~~~g~KVgivDERSEIAgC--~~GvPQ~~vG~RtDVLD~CPKAE----GmMM~  201 (282)
T TIGR02858       128 IISPPQCGKTTLLRDLARILSTGISKLGLKGKKVGIVDERSEIAGC--VNGVPQLDVGIRTDVLDGCPKAE----GMMML  201 (282)
T ss_pred             EECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHH--CCCCCCCCCCCCEEECCCCCHHH----HHHHH
T ss_conf             8868898851048889888607854246899746998432465654--58824144676067517885378----99999


Q ss_pred             CCCCCHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEE
Q ss_conf             34568279982799889980387859889999999997195230
Q gi|254781026|r   69 GLQVLPGEDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGECII  112 (186)
Q Consensus        69 ~~~~~pG~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i  112 (186)
T Consensus       202 iRSMSP--------~Viv~DEIG--r~ED~~Al~eA~naGV~~I  235 (282)
T TIGR02858       202 IRSMSP--------DVIVVDEIG--REEDVEALLEALNAGVSVI  235 (282)
T ss_pred             HHCCCC--------CEEEEECCC--CHHHHHHHHHHHCCCCEEE
T ss_conf             970698--------579981488--9533899999861675688