HHsearch alignment for GI: 254781026 and conserved domain: TIGR02881

>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=99.26  E-value=1e-11  Score=89.49  Aligned_cols=126  Identities=27%  Similarity=0.361  Sum_probs=91.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCC---CCCCCC-HHH
Q ss_conf             9777860599999998874889897885323000000278887565311120203775210011023---434568-279
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIG---GGLQVL-PGE   76 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~g---g~~~~~-pG~   76 (186)
T Consensus        47 FKGNPGTGKTTVAR~~gklf~em---------------nvL~KGH~iE-----------~ERADLVGEYIGHTAqkTRe~  100 (261)
T TIGR02881        47 FKGNPGTGKTTVARLLGKLFKEM---------------NVLSKGHLIE-----------VERADLVGEYIGHTAQKTREV  100 (261)
T ss_pred             EECCCCCCHHHHHHHHHHHHHHC---------------CCCCCCCEEE-----------EEECCCCCCCCCCHHHHHHHH
T ss_conf             42786684389999999998533---------------7567886788-----------762221223203004899999


Q ss_pred             HHHCCCCEEEEECHH--------HCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             982799889980387--------859889999999997195230100307898470156752274658878898876438
Q gi|254781026|r   77 DSLAHNGVLFLDEIP--------EFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIR  148 (186)
Q Consensus        77 i~lAh~GVLflDE~~--------e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c  148 (186)
T Consensus       101 ~kkA~GGvLFiDEAYSLaRGGEKDFGKEAIDtLVK~mEd~~~-------------~lvlILA------GY~~E-------  154 (261)
T TIGR02881       101 IKKALGGVLFIDEAYSLARGGEKDFGKEAIDTLVKAMEDQRN-------------ELVLILA------GYSDE-------  154 (261)
T ss_pred             HHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC-------------CEEEEEE------CCHHH-------
T ss_conf             998638800557777761488887662088899998761569-------------8689970------87689-------


Q ss_pred             CHHHHHHHHHHCCHHHHHCCCEEEECCCCCHHHHH
Q ss_conf             99999999851224321004259983885668885
Q gi|254781026|r  149 GPRCATEYQARISGPLMDRIDIRIAVPSRTHIRSF  183 (186)
Q Consensus       149 ~~~~~~~Y~~rls~plldR~Dl~v~~~~~~~~~~~  183 (186)
T Consensus       155 -----M~yFL~~NPGL~SRFPi~i~FPdY~~eeL~  184 (261)
T TIGR02881       155 -----MDYFLSLNPGLRSRFPISIDFPDYTVEELM  184 (261)
T ss_pred             -----HHHHHHCCCCCCCCCCCEEECCCCCHHHHH
T ss_conf             -----999862077977766505418899888999