HHsearch alignment for GI: 254781026 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=97.74 E-value=4.4e-05 Score=50.62 Aligned_cols=146 Identities=18% Similarity=0.108 Sum_probs=69.9
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCC--CEEECCCCCCCHHHCCCCCCCCCHHHHH
Q ss_conf 97778605999999988748898978853230000002788875653111--2020377521001102343456827998
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQN--RPFRSPHHSVTIAALIGGGLQVLPGEDS 78 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~--~p~~~~~~~~~~~~l~gg~~~~~pG~i~ 78 (186)
T Consensus 48 ltGe~GtGKTtllr~l~~~l~~~~~~------~~~i~~~~l~~~~-ll~~i~~~lg~~~~~~~~~~~~~~l~~~L~~~~~ 120 (269)
T TIGR03015 48 ITGEVGAGKTTLIRNLLKRLDQERVV------AAKLVNTRVDAED-LLRMVAADFGLETEGRDKAALLRELEDFLIEQFA 120 (269)
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCEE------EEEECCCCCCHHH-HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 97299898899999999845934548------9997699999999-9999999859898898999999999999999996
Q ss_pred HCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 27998899803878598899999999971952301003078984701567522746588788988764389999999985
Q gi|254781026|r 79 LAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQA 158 (186)
Q Consensus 79 lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~~ 158 (186)
T Consensus 121 ~g~~~vliIDEAq~L~~~~Le~Lr~L~n~e~~~----------~~ll~iiL~GqpeL------------------~~~L~ 172 (269)
T TIGR03015 121 AGKRALLVVDEAQNLTPELLEELRMLSNFQTDN----------AKLLQIFLVGQPEF------------------RETLQ 172 (269)
T ss_pred CCCCEEEEEECHHHCCHHHHHHHHHHHCCCCCC----------CCCEEEEEECCHHH------------------HHHHC
T ss_conf 699469997242219999999999997013588----------87048999578679------------------99872
Q ss_pred -HCCHHHHHCCCEEEECCCCCHHH
Q ss_conf -12243210042599838856688
Q gi|254781026|r 159 -RISGPLMDRIDIRIAVPSRTHIR 181 (186)
Q Consensus 159 -rls~plldR~Dl~v~~~~~~~~~ 181 (186)
T Consensus 173 ~~~~~~l~qRI~~~~~L~pl~~ee 196 (269)
T TIGR03015 173 SPQLQQLRQRIIASCHLGPLDREE 196 (269)
T ss_pred CCCHHHHHHCEEEEEEECCCCHHH
T ss_conf 740254555076799847999899