HHsearch alignment for GI: 254781026 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=99.59 E-value=4.8e-15 Score=109.05 Aligned_cols=161 Identities=16% Similarity=0.127 Sum_probs=101.7
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHC
Q ss_conf 97778605999999988748898978853230000002788875653111202037752100110234345682799827
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSLA 80 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~lA 80 (186)
T Consensus 601 FlGPTGVGKTElAK~LA~~LFg-------------~e~~liR~DMSEy~E~hsvsrLiGaPPGYVGy~eGG~LTe~Vrr~ 667 (852)
T TIGR03345 601 LVGPSGVGKTETALALAELLYG-------------GEQNLITINMSEFQEAHTVSRLKGSPPGYVGYGEGGVLTEAVRRK 667 (852)
T ss_pred EECCCCCCHHHHHHHHHHHHCC-------------CCCCEEEECCHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf 8789987789999999999719-------------861147842243210436878638999766748777210988809
Q ss_pred CCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCC--C--CCCCCCCCCHHHH---
Q ss_conf 99889980387859889999999997195230100307898470156752274658878--8--9887643899999---
Q gi|254781026|r 81 HNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMS--N--KDENVCIRGPRCA--- 153 (186)
Q Consensus 81 h~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~--~--~~~~~c~c~~~~~--- 153 (186)
T Consensus 668 PysVvLfDEIEKAHpdV~nilLQvlD~G~LtD~~Gr~vdF~--NtIIImTSN~---Gs~~i~~~~~~~~~~~~~~~~~~~ 742 (852)
T TIGR03345 668 PYSVVLLDEVEKAHPDVLELFYQVFDKGVMEDGEGREIDFK--NTVILLTSNA---GSDLIMALCADPETAPDPEALLEA 742 (852)
T ss_pred CCEEEEECHHHHCCHHHHHHHHHHHCCCEEECCCCCEEECE--EEEEEECCCH---HHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 98688861130028899999998724677757999988452--1299975724---479998640376555668999999
Q ss_pred --HHHHHHCCHHHHHCCCEEEECCCCCHH
Q ss_conf --999851224321004259983885668
Q gi|254781026|r 154 --TEYQARISGPLMDRIDIRIAVPSRTHI 180 (186)
Q Consensus 154 --~~Y~~rls~plldR~Dl~v~~~~~~~~ 180 (186)
T Consensus 743 v~~~l~~~F~PEFlnRi~ii~F~-~L~~~ 770 (852)
T TIGR03345 743 LRPELLKVFKPAFLGRMTVIPYL-PLDDD 770 (852)
T ss_pred HHHHHHHHCCHHHHCCEEEEEEC-CCCHH
T ss_conf 99999834798886456689736-89999