HHsearch alignment for GI: 254781026 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=93.39 E-value=0.031 Score=33.90 Aligned_cols=24 Identities=33% Similarity=0.450 Sum_probs=21.5
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 496 IvG~sGsGKSTL~kll~Gl~~p~~ 519 (694)
T TIGR03375 496 IIGRIGSGKSTLLKLLLGLYQPTE 519 (694)
T ss_pred EEECCCCCHHHHHHHHCCCCCCCC
T ss_conf 980589878899998556758998