HHsearch alignment for GI: 254781026 and conserved domain: TIGR03522
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=93.07 E-value=0.045 Score=32.94 Aligned_cols=24 Identities=38% Similarity=0.523 Sum_probs=21.6
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 33 llGpNGAGKTTl~~~l~Gl~~p~~ 56 (301)
T TIGR03522 33 FLGPNGAGKSTTMKIITGYLPPDS 56 (301)
T ss_pred EECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 999999819999999967956897