HHsearch alignment for GI: 254781026 and conserved domain: cd00009

>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=99.31  E-value=7e-12  Score=90.48  Aligned_cols=122  Identities=30%  Similarity=0.417  Sum_probs=78.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCC-----CCCCCHH
Q ss_conf             97778605999999988748898978853230000002788875653111202037752100110234-----3456827
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGG-----GLQVLPG   75 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg-----~~~~~pG   75 (186)
T Consensus        24 l~GppGtGKT~la~~ia~~~~~~--------------------~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~   78 (151)
T cd00009          24 LYGPPGTGKTTLARAIANELFRP--------------------GAPFLY---LNA--SDLLEGLVVAELFGHFLVRLLFE   78 (151)
T ss_pred             EECCCCCCHHHHHHHHHHHHCCC--------------------CCCEEE---EEH--HHCCHHHHHHHHHHHHHHHHHHH
T ss_conf             98999988659999999971213--------------------798278---547--77046777757605778898999


Q ss_pred             HHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99827998899803878598899999999971952301003078984701567522746588788988764389999999
Q gi|254781026|r   76 EDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATE  155 (186)
Q Consensus        76 ~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~  155 (186)
T Consensus        79 ~~~~~~~~vl~iDEi~~l~~~~~~~~~~~l~~~~~~~-------~~~~~~~vI~~tn~~~~-------------------  132 (151)
T cd00009          79 LAEKAKPGVLFIDEIDSLSRGAQNALLRVLETLNDLR-------IDRENVRVIGATNRPLL-------------------  132 (151)
T ss_pred             HHHHCCCCEEEEECHHHCCHHHHHHHHHHHHHHCCCC-------CCCCCEEEEEEECCCCC-------------------
T ss_conf             9997699869820166559999999999998715754-------06788899995289988-------------------


Q ss_pred             HHHHCCHHHHHCCCEEEECC
Q ss_conf             98512243210042599838
Q gi|254781026|r  156 YQARISGPLMDRIDIRIAVP  175 (186)
Q Consensus       156 Y~~rls~plldR~Dl~v~~~  175 (186)
T Consensus       133 --~~~~~~~~~R~~~~i~~~  150 (151)
T cd00009         133 --GDLDRALYDRLDIRIVIP  150 (151)
T ss_pred             --CCHHHHHHCCCCEEEECC
T ss_conf             --683776425598698638