HHsearch alignment for GI: 254781026 and conserved domain: cd00464
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.
Probab=94.93 E-value=0.012 Score=36.40 Aligned_cols=30 Identities=33% Similarity=0.442 Sum_probs=22.4
Q ss_pred CCCCCCCHHHHHHHHHHHHC--CCCCHHHHHH
Q ss_conf 97778605999999988748--8989788532
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSIL--LPLSLEESLE 30 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iL--P~l~~~e~le 30 (186)
T Consensus 4 LiG~~G~GKstigk~la~~l~~~fiD~D~~Ie 35 (154)
T cd00464 4 LIGMMGAGKTTVGRLLAKALGLPFVDLDELIE 35 (154)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCEEECCHHHH
T ss_conf 98899998899999999997989796859999