HHsearch alignment for GI: 254781026 and conserved domain: cd03216
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=93.75 E-value=0.03 Score=34.00 Aligned_cols=95 Identities=26% Similarity=0.305 Sum_probs=45.3
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHH-
Q ss_conf 9777860599999998874889897885323000000278887565311120203775210011023434568279982-
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSL- 79 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~l- 79 (186)
T Consensus 31 lvG~nGaGKSTl~~~i~Gl~~p~~G~-------i-~i~G~~i~~~~---~~~~~~-~gi~~v~qLSgG~~Qrv~iaral~ 98 (163)
T cd03216 31 LLGENGAGKSTLMKILSGLYKPDSGE-------I-LVDGKEVSFAS---PRDARR-AGIAMVYQLSVGERQMVEIARALA 98 (163)
T ss_pred EECCCCCCHHHHHHHHHCCCCCCCCE-------E-EECCEECCCCC---HHHHHH-CCCCEECCCCHHHHHHHHHHHHHH
T ss_conf 99889989999999995776898578-------9-99999999999---999998-799489469989999999999997
Q ss_pred CCCCEEEEECHH-HCCHHHHHHHHHHHHC
Q ss_conf 799889980387-8598899999999971
Q gi|254781026|r 80 AHNGVLFLDEIP-EFSPQTLNALRQPLET 107 (186)
Q Consensus 80 Ah~GVLflDE~~-e~~~~~l~~L~~~le~ 107 (186)
T Consensus 99 ~~p~llilDEPt~gLD~~~~~~i~~~l~~ 127 (163)
T cd03216 99 RNARLLILDEPTAALTPAEVERLFKVIRR 127 (163)
T ss_pred HCCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 29999999097557999999999999999