HHsearch alignment for GI: 254781026 and conserved domain: cd03218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=93.71 E-value=0.032 Score=33.81 Aligned_cols=24 Identities=29% Similarity=0.477 Sum_probs=21.4
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 31 llGpNGAGKSTll~~i~Gl~~p~~ 54 (232)
T cd03218 31 LLGPNGAGKTTTFYMIVGLVKPDS 54 (232)
T ss_pred EECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 999999619999999977999986