HHsearch alignment for GI: 254781026 and conserved domain: cd03225
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=94.77 E-value=0.014 Score=35.89 Aligned_cols=24 Identities=42% Similarity=0.638 Sum_probs=21.2
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 32 iiG~nGaGKSTLlk~i~Gl~~p~~ 55 (211)
T cd03225 32 IVGPNGSGKSTLLRLLNGLLGPTS 55 (211)
T ss_pred EECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 988999989999999964677988