HHsearch alignment for GI: 254781026 and conserved domain: cd03229

>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.40  E-value=0.0077  Score=37.44  Aligned_cols=24  Identities=38%  Similarity=0.726  Sum_probs=21.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             977786059999999887488989
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLS   24 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~   24 (186)
T Consensus        31 ivGpSG~GKSTllr~i~Gl~~p~~   54 (178)
T cd03229          31 LLGPSGSGKSTLLRCIAGLEEPDS   54 (178)
T ss_pred             EECCCCCHHHHHHHHHHCCCCCCC
T ss_conf             999999839999999985999996