HHsearch alignment for GI: 254781026 and conserved domain: cd03235
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=95.45 E-value=0.0066 Score=37.81 Aligned_cols=24 Identities=42% Similarity=0.683 Sum_probs=21.8
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 30 liGpNGaGKSTllk~i~Gl~~p~~ 53 (213)
T cd03235 30 IVGPNGAGKSTLLKAILGLLKPTS 53 (213)
T ss_pred EECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 999999869999999976878897