HHsearch alignment for GI: 254781026 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=93.84 E-value=0.03 Score=34.00 Aligned_cols=24 Identities=38% Similarity=0.517 Sum_probs=21.2
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 35 ivG~sGsGKSTLl~ll~gl~~p~~ 58 (220)
T cd03245 35 IIGRVGSGKSTLLKLLAGLYKPTS 58 (220)
T ss_pred EECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 999999859999999967254786