HHsearch alignment for GI: 254781026 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=95.60 E-value=0.0059 Score=38.10 Aligned_cols=24 Identities=38% Similarity=0.587 Sum_probs=21.7
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 35 iiG~sGsGKTTll~~i~Gl~~p~~ 58 (218)
T cd03255 35 IVGPSGSGKSTLLNILGGLDRPTS 58 (218)
T ss_pred EECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 999999869999999966999996