HHsearch alignment for GI: 254781026 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.61 E-value=0.0057 Score=38.19 Aligned_cols=24 Identities=42% Similarity=0.632 Sum_probs=21.5
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 31 iiG~SGsGKSTll~~i~gL~~p~~ 54 (235)
T cd03261 31 IIGPSGSGKSTLLRLIVGLLRPDS 54 (235)
T ss_pred EECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 999999729999999975999898