HHsearch alignment for GI: 254781026 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=93.73 E-value=0.033 Score=33.71 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=21.4
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 52 IvG~sGsGKSTL~~ll~gl~~p~~ 75 (257)
T cd03288 52 ICGRTGSGKSSLSLAFFRMVDIFD 75 (257)
T ss_pred EECCCCCCHHHHHHHHHHCCCCCC
T ss_conf 999999819999999960566788