HHsearch alignment for GI: 254781026 and conserved domain: pfam03969
>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=97.29 E-value=0.00032 Score=45.55 Aligned_cols=104 Identities=20% Similarity=0.189 Sum_probs=54.3
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHC
Q ss_conf 97778605999999988748898978853230000002788875653111202037752100110234345682799827
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSLA 80 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~lA 80 (186)
T Consensus 66 l~G~VGrGKTmLMDlFy~~lp~~~-K-----~R~HF-------------h~FM~~vH~~--l~~~~~~~dpl~~va~~l~ 124 (361)
T pfam03969 66 LWGGVGRGKTHLMDSFFESLPGER-K-----RRTHF-------------HRFMFRVHDE--LTTLQGGDDPLPIAADRFA 124 (361)
T ss_pred EECCCCCCHHHHHHHHHHHCCCCC-C-----CCCCH-------------HHHHHHHHHH--HHHHHCCCCCHHHHHHHHH
T ss_conf 889988869999999998677534-4-----45667-------------8999999999--9997667763899999997
Q ss_pred CC-CEEEEECHHHC---CHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCC
Q ss_conf 99-88998038785---98899999999971952301003078984701567522746588788
Q gi|254781026|r 81 HN-GVLFLDEIPEF---SPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSN 140 (186)
Q Consensus 81 h~-GVLflDE~~e~---~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~ 140 (186)
T Consensus 125 ~~~~lLCfDEFqV~DIaDAMIL~rLf~~Lf~~g---------------vvlV~TSN~~P~~LY~ 173 (361)
T pfam03969 125 NEARLLCFDEFEVDDIGDAMILGRLFEALFARG---------------VSLVATSNTAPEQLYR 173 (361)
T ss_pred HCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCC---------------CEEEEECCCCHHHHHC
T ss_conf 258779976356167888999999999999779---------------7899808999899836