HHsearch alignment for GI: 254781026 and conserved domain: pfam06068
>pfam06068 TIP49 TIP49 C-terminus. This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear
Probab=93.24 E-value=0.041 Score=33.16 Aligned_cols=21 Identities=38% Similarity=0.619 Sum_probs=18.2
Q ss_pred CCCCCCCHHHHHHHHHHHHCC
Q ss_conf 977786059999999887488
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILL 21 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP 21 (186)
T Consensus 55 laGppGTGKTAlA~aiakeLG 75 (395)
T pfam06068 55 IAGPPGTGKTALAIAISKELG 75 (395)
T ss_pred EECCCCCCHHHHHHHHHHHHC
T ss_conf 877999888999999999748