HHsearch alignment for GI: 254781026 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=98.69 E-value=1.4e-08 Score=71.19 Aligned_cols=137 Identities=27% Similarity=0.228 Sum_probs=77.5
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHC
Q ss_conf 97778605999999988748898978853230000002788875653111202037752100110234345682799827
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSLA 80 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~lA 80 (186)
T Consensus 7 l~G~~GsGKTtl~~~la~~~~~~~-------~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~ 74 (148)
T smart00382 7 IVGPPGSGKTTLARALARELGPPG-------GGVIYIDGEDILEEVLDQLL----LIIVGGKKASGSGELRLR-LALALA 74 (148)
T ss_pred EECCCCHHHHHHHHHHHHHHCCCC-------CCEEEEEHHHHHHHHHHHHH----HHHHCCCCCCCCHHHHHH-HHHHHH
T ss_conf 999997029999999998726689-------96899875998988898765----300011221051999999-999999
Q ss_pred CC---CEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99---889980387859889999999997195230100307898470156752274658878898876438999999998
Q gi|254781026|r 81 HN---GVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQ 157 (186)
Q Consensus 81 h~---GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~ 157 (186)
T Consensus 75 ~~~~~~viiiDei~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~vi~~~n~-----~~~---------------- 128 (148)
T smart00382 75 RKLKPDVLILDEITSLLDAEQEALLLLLEE-----LRLLLLLKSEKNLTVILTTND-----EKD---------------- 128 (148)
T ss_pred HHCCCCEEEEECCHHHCCCCCHHHHHHHHH-----HHHHCCCCCCCCEEEEEEECC-----CCC----------------
T ss_conf 844998999827502147620799999999-----998517657899899995699-----522----------------
Q ss_pred HHCCHHHHHCCCEEEECCC
Q ss_conf 5122432100425998388
Q gi|254781026|r 158 ARISGPLMDRIDIRIAVPS 176 (186)
Q Consensus 158 ~rls~plldR~Dl~v~~~~ 176 (186)
T Consensus 129 -~~~~~~~~~~~~~~~~~~ 146 (148)
T smart00382 129 -LGPALLRRRFDRRIVLLL 146 (148)
T ss_pred -CCHHHHCCCCCEEEEEEC
T ss_conf -498770744787999828